Fake Cake Cafe

論文メモ。

さぁて論文読まなきゃ。
  1. Enzyme promiscuity: mechanism and applications. 1: Trends Biotechnol. 2007 May;25(5):231-8. Epub 2007 Mar 26. (PubMed)
  2. Challenges to be faced in the reconstruction of metabolic networks from public databases. 1: Syst Biol (Stevenage). 2006 Sep;153(5):379-84. (PubMed)
  3. Enzymatic transition states and transition state analog design. 1: Annu Rev Biochem. 1998;67:693-720. (PubMed)
01:02 : 論文トラックバック(0)  コメント(2)

久々に論文メモ。

ブログには仕事のことはあまり書かないんですけど、ちゃんと仕事してますよってことで。いろいろ読まなきゃいけないものが出てきたのでメモメモ。
  1. A bioinformatician's view of the metabolome. Bioessays. 2006 May;28(5):534-45. (PubMed)
  2. Metabolomics: Current technologies and future trends. Proteomics. 2006 Sep;6(17):4716-23. (PubMed)
  3. The University of Minnesota Biocatalysis/Biodegradation Database: the first decade. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D517-21. (PubMed)
  4. MetaCyc: a multiorganism database of metabolic pathways and enzymes. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D511-6. (PubMed)
  5. Peptidomics: bridging the gap between proteome and metabolome. Proteomics. 2006 Feb;6(3):744-7. (PubMed)
  6. Metabolomics: from pattern recognition to biological interpretation. Drug Discov Today. 2005 Nov 15;10(22):1551-8. (PubMed)
  7. Application of metabolome data in functional genomics: a conceptual strategy. Metab Eng. 2005 Jul;7(4):302-10. (PubMed)
  8. Discovery metabolite profiling--forging functional connections between the proteome and metabolome. Life Sci. 2005 Aug 19;77(14):1759-66. (PubMed)
  9. Global strategies to integrate the proteome and metabolome. Curr Opin Chem Biol. 2005 Feb;9(1):62-8. (PubMed)
  10. Concept-based annotation of enzyme classes. Bioinformatics. 2005 May 1;21(9):2059-66. Epub 2005 Jan 20. (PubMed)
  11. Enhancement of the chemical semantic web through the use of InChI identifiers. Org Biomol Chem. 2005 May 21;3(10):1832-4. Epub 2005 Apr 18. (PubMed)
  12. Application of InChI to curate, index, and query 3-D structures. Proteins. 2005 Jul 1;60(1):1-4. (PubMed)
  13. Predictive metabolic engineering in plants: still full of surprises. Trends Biotechnol. 2005 Aug;23(8):381-3; discussion 383-4. (PubMed)
  14. Development of a citrus genome-wide EST collection and cDNA microarray as resources for genomic studies. Plant Mol Biol. 2005 Feb;57(3):375-91. (PubMed)
  15. The next wave in metabolome analysis. Trends Biotechnol. 2005 Nov;23(11):544-6. Epub 2005 Sep 12. (PubMed)
  16. KEGG-based pathway visualization tool for complex omics data. In Silico Biol. 2005;5(4):419-23. (PubMed)
  17. Encoding microbial metabolic logic: predicting biodegradation. J Ind Microbiol Biotechnol. 2004 Jul;31(6):261-72. Epub 2004 Jul 10. (PubMed)
  18. Assignment of endogenous substrates to enzymes by global metabolite profiling. Biochemistry. 2004 Nov 16;43(45):14332-9. (PubMed)
  19. BRENDA, the enzyme database: updates and major new developments. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D431-3. (PubMed)
  20. Enzyme classification by ligand binding. Proteins. 2004 Dec 1;57(4):711-24. (PubMed)
  21. The proteome and the metabolome. Bioinformatics. 2003 Oct;19 Suppl 2:II237. (PubMed)
  22. GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts. Science. 2003 Sep;301(5641):1849. (PubMed)
  23. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science. 2003 Sep;301(5641):1849. (PubMed)
  24. Metabolome diversity: too few genes, too many metabolites? Phytochemistry. 2003 Mar;62(6):837-49. (PubMed)
  25. BSD: the Biodegradative Strain Database. Nucleic Acids Res. 2003 Jan 1;31(1):152-5. (PubMed)
  26. Microbial pathway prediction: a functional group approach. J Chem Inf Comput Sci. 2003 May-Jun;43(3):1051-7. (PubMed)
  27. BRENDA: a resource for enzyme data and metabolic information. Trends Biochem Sci. 2002 Jan;27(1):54-6. (PubMed)
  28. Chemical strategies for functional proteomics. Mol Cell Proteomics. 2002 Oct;1(10):781-90. (PubMed)
気が遠くなってきた。。。。
22:35 : 論文トラックバック(0)  コメント(10)

RNAi

うーむ。なんだか大変なことになってますなぁ。

http://headlines.yahoo.co.jp/hl?a=20050914-00000003-kyodo-soci
http://headlines.yahoo.co.jp/hl?a=20050913-00000216-yom-soci
01:32 : 論文トラックバック(0)  コメント(2)

今週の論文メモ。

まだ続いてますよ。論文メモ。週に2報! (正直週に2報じゃ足りない気はするけど、あまり飛ばしすぎても続かなそうだし)
 ...続きを読む
01:57 : 論文トラックバック(0)  コメント(0)

今週の論文メモ。

今週の論文メモ。1週間あたり2報読むことを目標にしています
 ...続きを読む
02:43 : 論文トラックバック(0)  コメント(2)